Publications

Peer-reviewed research advancing our understanding of immune cell biology, tumor microenvironments, and therapeutic interventions.

25 Publications
2016 - Present
25 of 25 publications
Key figure from Incretin Triple Agonist Retatrutide (LY3437943) Alleviates Obesity‑Associated Cancer Progression
2025

Incretin Triple Agonist Retatrutide (LY3437943) Alleviates Obesity‑Associated Cancer Progression

Marathe SJ, Grey EW, Bohm MS, Joseph SC, Ramesh AV, Cottam MA, Idrees K, Wellen KE, Hasty AH, Rathmell JC, Makowski L

npj Metabolic Health and Disease

Bulk RNA-seqImmunologyOncology+3 more
View Publication
Key figure from  Calorie restriction increases insulin sensitivity to promote beta cell homeostasis and longevity in mice
2024

Calorie restriction increases insulin sensitivity to promote beta cell homeostasis and longevity in mice

Dos Santos C, Cambraia A, Shrestha S, Cutler M, Cottam M, Perkins G, Lev‑Ram V, Roy B, Acree C, Kim KY, Deerinck T, Dean D, Cartailler JP, MacDonald PE, Hetzer M, Ellisman M, Arrojo E Drigo

Nature Communications

MouseSingle-cell RNA-seqMultiomics+2 more
View Publication
Key figure from Transcriptomic Plasticity of the Circadian Clock in Response to Photoperiod: A Study in Male Melatonin-Competent Mice
2024

Transcriptomic Plasticity of the Circadian Clock in Response to Photoperiod: A Study in Male Melatonin-Competent Mice

Cox OH, Giannoni-Guzmán MA, Cartailler JP, Cottam MA, McMahon DG

Journal of Biological Rhythms

MouseBulk RNA-seq
View Publication
Key figure from Gli2 Overexpression Alters the Differentiation Status of Dedifferentiated Liposarcoma Cells and Results in an Immunosuppressive Myeloid Phenotype in Orthotopic Tumors
2024

Gli2 Overexpression Alters the Differentiation Status of Dedifferentiated Liposarcoma Cells and Results in an Immunosuppressive Myeloid Phenotype in Orthotopic Tumors

Bennett NE, Beadle EP, Parker DV, Coe EJ, Cottam MA, Baum JE, Miller JS, Serrenho JA, Rhoades JA

bioRxiv

MouseBulk RNA-seqOncology
View Publication
Key figure from Disruption of nucleotide biosynthesis reprograms mitochondrial metabolism to inhibit adipogenesis
2024

Disruption of nucleotide biosynthesis reprograms mitochondrial metabolism to inhibit adipogenesis

Pinette JA, Myers JW, Park WY, Bryant HG, Eddie AM, Wilson GA, Montufar C, Shaikh Z, Vue Z, Nunn ER, Bessho R, Cottam MA, Haase VH, Hinton AO, Spinelli JB, Cartailler JP, Zaganjor

Journal of Lipid Research

MouseMetabolismBulk RNA-seq
View Publication
2025

Effect of chemotherapy on passenger mutations in metastatic colorectal cancer

Siddiqui MT, Cottam MA, Mirza MB, Keeli LB, Kristen CK, Washington K, Idrees

Under review at Molecular Oncology

HumanGenomicsOncology+1 more
2025

Regulatory Macrophages Contribute to Tumor Cell Plasticity in Colorectal Cancer Metastases

Cottam MA, Mirza MB, Arner EN, Siddiqui MT, Marincola Smith P, Piscombe C, Revetta F, Hatem Z, Tasneem N, Cameron A, Beckermann KE, Edwards J, Rathmell JC, Lau KS, Washington MK, Jamieson NB, Raoof M, Idrees K

In revision

HumanSingle-cell RNA-seqImmunology+6 more
2024

Empagliflozin treatment during weight loss does not improve post‑weight regain glucose homeostasis in mice

Bhanot M, Cottam MA, Winn NC, Hasty A

In preparation

MetabolismHumanMouse+1 more
Key figure from Fructose regulates the pentose phosphate pathway and induces an inflammatory and resolution phenotype in Kupffer cells
2024

Fructose regulates the pentose phosphate pathway and induces an inflammatory and resolution phenotype in Kupffer cells

Lodge M, Scheidemantle G, Adams VR, Cottam MA, Richard D, Breuer D, Thompson P, Shrestha K, Liu X, Kennedy A.

Scientific Reports

Flow CytometrySingle-cell RNA-seqMetabolism+1 more
View Publication
Key figure from Multiomics reveals persistence of obesity-associated immune cell phenotypes in adipose tissue during weight loss and weight regain in mice
2022

Multiomics reveals persistence of obesity-associated immune cell phenotypes in adipose tissue during weight loss and weight regain in mice

ottam MA, Winn NC, Caslin HL, Hasty AH

Nature Communications

Single-cell RNA-seqMetabolismMouse+2 more
View Publication
Key figure from Interrupting T Cell Memory Ameliorates Exagger‑ ated Metabolic Response to Weight Cycling
2025

Interrupting T Cell Memory Ameliorates Exagger‑ ated Metabolic Response to Weight Cycling

Garcia JN, Cottam MA, Rodriguez AS, Agha AFH, Winn NC, Hasty A

bioRxiv

Single-cell RNA-seqMetabolismMouse+2 more
View Publication
Key figure from Comparison of Lean, Obese, and Weight-Loss Models Reveals TREM2 Deficiency Attenuates Breast Cancer Growth Uniquely in Lean Mice and Alters Clonal T-cell Populations
2025

Comparison of Lean, Obese, and Weight-Loss Models Reveals TREM2 Deficiency Attenuates Breast Cancer Growth Uniquely in Lean Mice and Alters Clonal T-cell Populations

Pierro EW, Cottam MA, An H, Lehmann BD, Pietenpol JA, Wellen KE, Makowski L, Rathmell JC, Fingleton B, Hasty AH

Cancer Research

Single-cell RNA-seqMetabolismMouse+4 more
View Publication
2025

Weight loss enriches adipose tissue for granzyme K producing clonal CD8+ T cells that induce inflammation in bystander cells during weight regain

Cottam MA, Schleh M, Garcia JN, Winn NC, Hasty AH, Caslin HL

In preparation

MouseSingle-cell RNA-seqMetabolism+2 more
Key figure from PD‑1 is induced on tumor‑associated macrophages in obesity to directly restrain anti‑tumor immunity
2024

PD‑1 is induced on tumor‑associated macrophages in obesity to directly restrain anti‑tumor immunity

Bader JE, Wolf MM, Lupica‑Tondo GL, Madden MZ, Reinfeld BI, Arner EN, Hathaway ES, Steiner KK, Needle GA, Hatem Z, Landis MD, Faneuff EE, Blackman A, Wolf EM, Cottam MA, Ye X, Bates ME, Smart K, Wang W, Pinheiro LV, Christofides A, Smith D, Boussiotis VA, Haake SM, Beckermann KE, Wellen KE, Reinhart‑King CA, Serezani CH, Lee CH, Aubrey C, Chen H, Rathmell WK, Hasty AH, Rathmell JC

Nature

Single-cell RNA-seqOncologyMetabolism+3 more
View Publication
Key figure from Deletion of Ascl1 in pancreatic ꞵ‑cells improves insulin secretion, promotes parasympathetic innervation, and attenuates dedifferentiation during metabolic stress
2023

Deletion of Ascl1 in pancreatic ꞵ‑cells improves insulin secretion, promotes parasympathetic innervation, and attenuates dedifferentiation during metabolic stress

Osipovich AB, Zhou FY, Chong JJ, Trinh LT, Cottam MA, Shrestha S, Cartailler JP, Magnuson MA

Molecular Metabolism

MouseMetabolismSingle-cell RNA-seq+2 more
View Publication
Key figure from Single cell RNA-sequencing suggests a novel lipid associated mast cell population following weight cycling
2023

Single cell RNA-sequencing suggests a novel lipid associated mast cell population following weight cycling

Caslin HL, Cottam MA, Betjemann AM, Mashayekhi M, Silver HJ, Hasty AH

bioRxiv

MouseMetabolismSingle-cell RNA-seq+3 more
View Publication
Key figure from Immune profiling of murine cardiac leukocytes identifies triggering receptor expressed on myeloid cells 2 as a novel mediator of hypertensive heart failure
2023

Immune profiling of murine cardiac leukocytes identifies triggering receptor expressed on myeloid cells 2 as a novel mediator of hypertensive heart failure

Smart CD, Fehrenbach DJ, Wassenaar JW, Agrawal V, Fortune NL, Dixon DD, Cottam MA, Hasty AH, Hemnes AR, Doran AC, Gupta DK, Madhur MS

Cardiovascular Research

Single-cell RNA-seqFlow CytometryImaging+4 more
View Publication
Key figure from Weight cycling induces innate immune memory in adipose tissue macrophages
2023

Weight cycling induces innate immune memory in adipose tissue macrophages

Caslin HL, Cottam MA, Pinon JM, Boney LY, Hasty AH

Frontiers in Immunology

MetabolismMouseImmunology+1 more
View Publication
Key figure from Weight cycling impaires pancreatic insulin secretion but does not perturb whole‑body insulin action in mice with diet‑induced obesity
2023

Weight cycling impaires pancreatic insulin secretion but does not perturb whole‑body insulin action in mice with diet‑induced obesity

Winn NC, Cottam MA, Bhanot M, Caslin HL, Garcia JN, Arrojo E Drigo R, Hasty AH

Diabetes

MetabolismMouseImaging+1 more
View Publication
Key figure from ROS‑Degradable Polythioketal Urethane Foam Dressings to Promote Porcine Skin Wound Repair
2022

ROS‑Degradable Polythioketal Urethane Foam Dressings to Promote Porcine Skin Wound Repair

atil P, Russo KA, McCune JT, Pollins AC, Cottam MA, Dollinger BR, Colazo JM, Yu F, Martin JR, Gupta MK, Cardwell NL, Davison JM, Thompson CM, Brabul A, Hasty AH, Guelcher SA, Duvall CL

Science Translational Medicine

ImagingFlow Cytometry
View Publication
Key figure from  Myeloid‑specific deletion of ferroportin impairs macrophage bioenergetics but is disconnected from systemic insulin action in adult mice
2021

Myeloid‑specific deletion of ferroportin impairs macrophage bioenergetics but is disconnected from systemic insulin action in adult mice

Winn NC, Wolf EM, Cottam MA, Bhanot M, Hasty AH

American Journal of Physiology: Endocrinology Metabolism

MetabolismMouseFlow Cytometry+1 more
View Publication
Key figure from  Exercise and Adipose Tissue Immunity: Outrunning Inflammation
2021

Exercise and Adipose Tissue Immunity: Outrunning Inflammation

Winn NC, Cottam MA, Wasserman DH, Hasty AH

Obesity

Metabolism
View Publication
Key figure from Kupffer cell release of platelet activating factor drives dose limiting toxicities of nucleic acid nanocarriers
2021

Kupffer cell release of platelet activating factor drives dose limiting toxicities of nucleic acid nanocarriers

Jackson MA, Patel SS, Yu F, Cottam MA, Glass EB, Hoogenboezem EN, Fletcher RB, Dollinger BR, Patil P, Liu DD, Kelly IB, Bedingfield SK, King AR, Miles RE, Hasty AM, Giorgio TD, Duvall CL

Biomaterials

MouseFlow Cytometry
View Publication
Key figure from High CD8 T‑Cell Receptor Clonality and Altered CDR3 Properties Are Associated With Elevated Isolevuglandins in Adipose Tissue During Diet‑Induced Obesity
2018

High CD8 T‑Cell Receptor Clonality and Altered CDR3 Properties Are Associated With Elevated Isolevuglandins in Adipose Tissue During Diet‑Induced Obesity

McDonnell WJ, Koethe JR, Mallal SA, Pilkinton MA, Kirabo A, Ameka MK, Cottam MA, Hasty AH, Kennedy AJ

Diabetes

Single-cell RNA-seqMetabolismFlow Cytometry+2 more
View Publication
Key figure from Links between Immunologic Memory and Metabolic Cycling
2018

Links between Immunologic Memory and Metabolic Cycling

Cottam MA, Itani HA, Beasley AA 4th, Hasty A

Journal of Immunology

MetabolismImmunology
View Publication

Interested in collaboration?

Let's discuss how we can advance immunological research together.

Get In Touch
© 2025 Matthew A. Cottam, Ph.D.