Open to new opportunities!

Matthew A. Cottam, Ph.D.

Immunologist | Data Scientist | Consultant

Translating Complex Data into Therapeutic Strategy

Download CV
25+
Publications
Peer-reviewed research in Nature, Science, Cancer Research
10+
Years Experience
Wet lab & computational biology expertise
3.6M+
Cells Analyzed
Single-cell & multi-omics data
4,344
Cups of Coffee
Consumed

Bridging Academic Research & Pharmaceutical Innovation

I am a PhD immunologist leading a team of investigators to better understand immunotherapy response in patients with colorectal cancer. Our team uses a bed-to-benchside (and back) approach where human specimens are collected and processed into a research biorepository we established in 2024. We use large-scale next-generation sequencing (NGS) and spatial-omics approaches to identify biomarkers and novel targets for immunotherapy development. Then, we validate this work using in vitro models or develop knockout/reporter mice. As a scientist, I have extensive experience in all forms of NGS, including single cell multiome, immune receptor profiling, and spatial transcriptomics and a decade of experience in flow cytometry and molecular biology techniques.

Core Expertise

Single-cell RNAseqImmune Repertoire ProfilingImmunotherapy OutcomesFlow CytometrySpatial TranscriptomicsProteomicsImage AnalysisPython/R Analytics

3D Visualization of Adipose Immune Cells

Loading interactive visualization...

Preparing visualization...

Beyond the Bench

Leadership & Operational Excellence in High-Impact Research

  • Grant Writing & Compliance: Lead author of grant proposals and MTAs; collaborate with legal teams and TTOs.
  • Regulatory Oversight: Contribute to IRB submissions to ensure ethical compliance for human subjects research.
  • Data Integration & Analysis: Extract and analyze EHR patient data in partnership with clinical informatics using investigative AI tools.
  • Financial Stewardship: Manage budgets, procurement, and lab operations to support research scalability.
  • Mentorship & Team Development: Mentor postdocs and students, fostering rigor and independence.
  • Collaborative Project Management: Coordinate multi-site collaborations and maintain stakeholder alignment.
  • Scientific Communication: Prepare presentations and manuscripts for broad academic and industry impact.
  • Animal Care and Compliance: Developing animal care protocols and monitoring animal health for research.

Want to work together?

Let's explore how computational immunology can drive your next breakthrough.

© 2025 Matthew A. Cottam, Ph.D.